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Articles by Cristy Gelling (96 results)
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The Fragile Y
Y chromosomes have come and gone many times during evolutionary history. Take beetles. When Heath Blackmon and Jeff Demuth modeled sex chromosome evolution in more than a thousand beetle species, they found the Y chromosome had independently evolved around 65 times in the suborder Adephaga alone. And as fast as this group evolved new Y chromosomes,…
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More Bang for your GWAS Buck
For genome-wide association studies, data is power. The more data you have, the more statistical power you wield to find genetic associations. But are there ways to get more from the data you already have? In the May issue of GENETICS, Kaufman and Rosset describe a testing framework that substantially boosts the power of genome-wide…
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Neanderthal Relations: Interbreeding or Ancestral Structure?
In Eurasia, humans once had Neanderthals for neighbors. That time of co-existence seems to have left its marks in our genome; non-Africans today share more genetic variants with Neanderthals than Africans do. But does this really mean there was interbreeding between humans and the Hominids next door? Some have previously proposed an alternative explanation for that…
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New Fish on the Block
The medaka, or Japanese rice fish, is a century-old genetic model on the rise again. Long studied by scientists in Japan, it has been rediscovered by the wider research community over the last decade as a flexible tool for vertebrate genetics. Part of the appeal is the medaka’s amenability to inbreeding. In the latest issue…
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Sea Anemone & Friends
Coral reefs around the world are “bleaching”, a threat caused by breakdown of the symbiosis between the coral animals (cnidaria) and the dinoflagellate algae that live within their cells. Yet this crucial symbiotic partnership is poorly understood. To address this knowledge gap, biologists are developing a suite of genomic tools for the sea anemone Aiptasia. This…
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Aging Males and Aneuploidy
Do aging males make poorer quality sperm? Older mothers face a well-established risk of producing eggs with chromosome abnormalities, but it is less clear how age affects meiosis in males. In the February issue of GENETICS, Vrooman et al. investigated chromosome dynamics during spermatogenesis in mice of different ages. They found that meiotic errors increased…
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Old Transposable Elements, New Tricks
Transposable elements don’t proliferate in genomes at a steady pace; they often arrive in bursts. But models of neutral TE evolution assume transposition occurs at a constant rate. That makes it harder to test, for instance, whether low TE allele frequencies in a population are due to negative selection or just a recent transposition burst.…
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Assembling a Colossus
The loblolly pine genome is big. Bloated with retrotransposons and other repetitive sequences, it is seven times larger than the human genome and easily big enough to overwhelm standard genome assembly methods. This forced the loblolly pine genome sequencing team, led by David Neale at the University of California, Davis, to look for ways to…